Assessment of Phytochemical and in Silico Molecular Docking of Masularia acuminata for Dental Biofilm Inhibition

Authors

  • Muhammed Maikarfi Department of Applied Chemistry, College of Science and Technology, Kaduna Polytechnic, PMB 2021, Kaduna, Nigeria Author
  • Ibrahim Usman Adamu Department of Applied Chemistry, College of Science and Technology, Kaduna Polytechnic, PMB 2021, Kaduna, Nigeria Author
  • Adisa Funmilayo Mofoluwaso Department of Applied Chemistry, College of Science and Technology, Kaduna Polytechnic, PMB 2021, Kaduna, Nigeria Author
  • Abdulhameed Oluwatomi Alli Department of Science Laboratory, Institute of Applied Sciences, Kwara State Polytechnic. PMB 1375, Ilorin, Nigeria Author

DOI:

https://doi.org/10.47430/ujmr.25102.018

Keywords:

Dental biofilm, Glucosyltransferase, Masularia acuminata, oral pathogens, Phytochemicals

Abstract

Dental caries is a prevalent oral infection worldwide, caused by bacterial adherence to the tooth surface and the formation of biofilms.  Prevention of adherence on tooth enamel is crucial in halting orodental progression.  The objective was to investigate the anti-biofilm potential of Masularia acuminata stem extract.  Methanolic stem extract was prepared by maceration.  GC-MS was adopted in revealing the compounds present in the plant.  Molecular docking simulation was used to reveal the affinity of the plant compounds to the active site of chain B of glycosyltransferase-I, in addition to the use of the Protein Data Bank (PDB) and AutodockVina. Protein preparation and visualization were carried out using BIOVIA Discovery Studio.  The pharmacokinetics, pharmacological, and biological activities of the plant compounds were carried out using PubChem, Swiss ADME, and PASS servers.  GC-MS revealed forty non-fragmental compounds.  Molecular docking reveals the affinities of the compound, while the different pharmacological potentials of the lead compounds (L1-L5) are demonstrated through SwissADME.  Methanolic stem extract of M. acuminata has pharmacological potential against β-glucosyltransferase-I and may be considered an alternative means for controlling oral pathogens by blocking the activities of glucosyltransferase and further preventing bacteria from adhering to tooth enamel.

References

Adekunle, A.A. and Odukoya, K.A. (2006). Antifungal Activities of Methanol and Aqueous Crude Extracts of Four Nigerian Chewing Sticks. EthnoBotanical Leaflets. http://www.siu/-ebl/leaflets

Akshay RY, Shrinivas KM (2020). Anticancer activity and in-silico ADMET analysis of Malvastrum coromandelianum. Int J Pharm Sci Res 11:71–73

Al-Jawad, M.A., Ali, M.M., &Saif, S. S. (2021). The Clinical Effect of Super Oxidized Water Mouthwash on The Periodontal Parameters (Plaque Index, Gingival Index And Bleeding on Probing) for Patients with Dental Biofilm Induced Gingivitis. Indian Journal of Forensic Medicine & Toxicology, 15(2), 1247–1252. DOI: https://doi.org/10.37506/ijfmt.v15i2.14495

Bhagavathy, S., Mahendiran, C., Kanchana, R. (2018). Identification of glucosyltransferase inhibitors from Psidiumguajava against Streptococcus mutans in dental caries. J Tradit Complement Med.vol9(2):124-37. DOI: https://doi.org/10.1016/j.jtcme.2017.09.003

Chandrabhan, D., Hemlata, R., Renu, B., & Pradeep, V. (2012). Isolation of Dental Caries Bacteria from Dental Plaque and Effect of Tooth Pastes on Acidogenic Bacteria. Open Journal of Medical Microbiology, 02(03), 65–69. DOI: https://doi.org/10.4236/ojmm.2012.23009

Clark, A.M, Dole, K., Coulon-Spektor, A., McNutt, A., Grass, G., Freundlich, J.S., Reynolds, S., Ekins, R.C. (2015). Open-source bayesian models. 1. Application to ADME/Tox and drug discovery datasets. J Chem Inf Model 55:1231–1245. DOI: https://doi.org/10.1021/acs.jcim.5b00143

Dowe, E., Ahonkhai, I., Ayinde, B.A. and Uwumarongie, H.O. (2016). Phytochemical and antimicrobial evaluation of the methanol stem extract and fraction of Massulariaacuminata G. Don (Rubiaceae) against isolated odontopathogens. Ewemen Journal of Microbial Research. 2(1): 13-21.

Ferrazzano, G.F, Amato, I., Ingenito, A., Zarrelli, A., Pinto, G., Pollio, A. (2011). Plant polyphenols and their anti-cariogenic properties: a review. Molecules.;16(2):1486-507. DOI: https://doi.org/10.3390/molecules16021486

Gloster, T.M. &Vocadlo, D.J. (2012). Developing inhibitors of glycan processing enzymes as tools for enabling glycobiology. Nat Chem Biol.;8:683–94. DOI: https://doi.org/10.1038/nchembio.1029

Kareem, K.T., Alli, S.O., Atayese, A.O., Ezeh, A.R., Alaga, T.O. (2012). Antibacterial Effect of Distemonanthus benthamianus Extract Against Some Oral Pathogens. International Journal of Applied Science and Technology. Vol.2;2

Kharwar RN, Misha A, Gond SK, Stierle A &Stierle D (2011). Anticancer compounds derived from fungal endophytes: Their importance and future challenges. Natural Product Reports, 28(7): 1208-1228. DOI: https://doi.org/10.1039/c1np00008j

Mandava, K., Batchu, U.R., Kakulavaram, S. (2019). Design and study of anticaries effect of different medicinal plants against S.mutansglucosyltransferase. BMC Complement Altern. Med. 19, 197. DOI: https://doi.org/10.1186/s12906-019-2608-3

Omer, A.G., Qarani, S.M., Khalil, A.K. (2011). In vitro antimicrobial activity of Miswak extracts against some oral pathogenic isolates. Zanco J Med Sci. 14:71‑8. DOI: https://doi.org/10.15218/zjms.2010.012

Sharipovna, N.N., & Tokhirovna, M.L. (2022). Evaluation of the Use of GlycosaminoglikansIn Elimination of Bone Tissue Changes In Chronic Disease Periodontitis. Frontline Medical Sciences and Pharmaceutical Journal, 02(05), 41–54. DOI: https://doi.org/10.37547/medical-fmspj-02-05-06

Swierczewska, M., Lee, K.C, Lee, S. (2015). What is the future of PEGylated therapies? Expert Opin Emerg Drugs 20:531–536. DOI: https://doi.org/10.1517/14728214.2015.1113254

Troth, O., Olson, A.J. (2010). AutoDockVina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem. Jan 30;31 (2):455-61 DOI: https://doi.org/10.1002/jcc.21334

Ugoji, E., Egwari, L.O., and Obisesan, B. (2000). Antibacterial Activities of Aqueous Extract of Ten African Chewing Sticks on Oral Pathogens. Nigeria Journal of International Medicine, 3, 7-11

Veber, D.F., Stephen, R.J., Hung-Yuan, C., Brian, S.R., Keith, WW., Kenneth, D.K. (2002). Molecular properties that influence the oral bioavailability of drug candidates. J Med Chem 45:2615–2623. DOI: https://doi.org/10.1021/jm020017n

Veloz, J.J., Saavedra, N., Alvear, M., Zambrano, T., Barrientos, L., and Salazar, L.A. (2016). Polyphenol-rich extract from propolis reduces the expression and activity of Streptococcus mutansglucosyltransferases at subinhibitory concentrations. Biomed Res Int. 2016:4302706. DOI: https://doi.org/10.1155/2016/4302706

Published

2025-12-30

How to Cite

Maikarfi, M., Adamu, I. U., Mofoluwaso, A. F., & Alli, A. O. (2025). Assessment of Phytochemical and in Silico Molecular Docking of Masularia acuminata for Dental Biofilm Inhibition. UMYU Journal of Microbiology Research (UJMR), 10(2), 155-163. https://doi.org/10.47430/ujmr.25102.018

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